BioMarker

Team Leader:

Ingo Helbig, MD

Ingo Helbig, MD

Biomarker Leadership Clinical Outcomes Assessment Leadership NHS Leadership Leadership Biomarker NHS and Clinical Outcomes Assessment

What are biomarkers?

Biomarkers in rare disorder research are measurable biological features or indicators that provide information about the presence, severity, and progression of a disorder, as well as response to any treatments or therapies. They include a wide range of biological molecules, such as genes (DNA), proteins, or metabolites that can be objectively measured and quantified. They can also include brain activity itself.

For example, we know that the STXBP1 disorder patient population exhibits a wide range of symptoms and severity. If we had a blood test or an EEG test that could predict the severity of a given symptom in people with STXBP1, this would enable us to better predict a child’s long-term prognosis or response to treatment. Currently there are no biomarkers for STXBP1 or SYNGAP1. Thus, one of our highest priorities is to identify physiological and molecular biomarkers in these patients.

Physiological biomarkers – Quantitative electroencephalography (qEEG)

ENDD researchers at CHOP use quantitative electroencephalography (qEEG) measurements to gain insights into the neurophysiological dysfunction in STXBP1 and SYNGAP1 disorders. qEEG is a non-invasive technique that records electrical activity in the brain through electrodes placed on the scalp with a specialized cap. The data obtained can provide highly specific, quantitative information about brain activity. Ultimately, our goal is to use qEEG to discover a specific ‘STXBP1’ or ‘SYNGAP1’ brain activity signature or fingerprint which can be used to assess treatment efficacy.

qEEG schematic

Molecular biomarkers – Proteomic analyses

Conducting various proteomic tests of markers found in the cerebrospinal fluid (CSF) and blood serum of people with STXBP1 and SYNGAP1 disorders will help us determine whether certain proteins are disproportionately found in patients versus controls samples. The use of proteomic biomarkers in STXBP1 and SYNGAP1 disorders aims to discover potential new targets that may be of therapeutic benefit or may function as a molecular readout of treatment effectiveness.

SYNGAP1
SYNGAP1
STXBP1
STXBP1

Clinical Outcomes Assessment

Team Leader:

Ingo Helbig, MD

Ingo Helbig, MD

Biomarker Leadership Clinical Outcomes Assessment Leadership NHS Leadership Leadership Biomarker NHS and Clinical Outcomes Assessment
Torrey Chisari, BA

Torrey Chisari, BA

Clinical Outcomes Assessment Leadership Our team Helbig Lab Staff NHS and Clinical Outcomes Assessment
Julie Orlando, DPT, PhD

Julie Orlando, DPT, PhD

Clinical Outcomes Assessment Leadership Our team Helbig Lab Staff NHS and Clinical Outcomes Assessment
Stephanie Zbikowski, MACCCSLP, CNDT

Stephanie Zbikowski, MACCCSLP, CNDT

Clinical Outcomes Assessment Leadership Our team Helbig Lab Staff NHS and Clinical Outcomes Assessment
Bintou Bane, BA

Bintou Bane, BA

Clinical Outcomes Assessment Leadership Our team Helbig Lab Staff NHS and Clinical Outcomes Assessment
Rency Dhaduk, BS

Rency Dhaduk, BS

Clinical Outcomes Assessment Leadership Our team Helbig Lab Staff NHS and Clinical Outcomes Assessment

What are clinical outcomes for clinical trial studies?

Clinical outcomes are the predefined and measurable endpoints or results of a clinical trial that researchers use to assess whether a new intervention (a drug, medical device, vaccine, or therapy) is safe, effective, has limited side effects, and provides meaningful benefits to patients. Clinical trial outcomes are carefully selected to answer specific research questions and to guide regulatory decisions.

For the STXBP1 and SYNGAP1 natural history studies, we selected and standardized tests to cover as many aspects of these disorders as possible, thereby providing us with a highly accurate clinical picture of each disorder. The clinical outcomes our NHS measures include seizure, cognitive and social development, behavior, adaptive functioning, fine and gross motor function, language and communication, autism features, gastrointestinal function, and sleep patterns. Knowing the most difficult symptoms experienced in these conditions can help scientists know where the most help is needed for people with genetic conditions, and which are the most pertinent measures to focus on in clinical trials.

Natural History Study

Team Leader:

Ingo Helbig, MD

Ingo Helbig, MD

Biomarker Leadership Clinical Outcomes Assessment Leadership NHS Leadership Leadership Biomarker NHS and Clinical Outcomes Assessment

What is a natural history study?

A natural history study (NHS) is a medical research study that collects comprehensive information about the development, symptoms, and lived experiences of people with a rare genetic condition. They are considered longitudinal observational studies, because they document the course of a genetic disorder in people over several years, during which time they receive standard treatments for these disorders. A typical NHS involves patients of all ages and may include people with varying degrees of disorder severity. Enrolling as many people into the study as possible helps scientists understand the full scope of a genetic condition. Importantly, these studies—whose goal is to improve prognosis and the quality of life for the patients as well as their families—are a means for the families of people with STXBP1 and SYNGAP1 disorders to actively participate in research, share their experiences, and contribute to the scientific understanding of these disorders. Dr. Ingo Helbig of CHOP leads the NHS for both STXBP1 and SYNGAP1.

Why are natural history studies important for STXBP1 and SYNGAP1 disorders?

Natural history studies are vital for rare disorders because they fill critical knowledge gaps, facilitate the development of treatments, improve patient care, empower patient communities, and contribute to advancements in healthcare policy.

Natural history studies for STXBP1 and SYNGAP1 disorders will help clinicians and researchers establish a baseline of information regarding clinical features, symptoms, and the developmental progression experienced by affected people. Data from these natural history studies will help to generate more effective care and management strategies for STXBP1 and SYNGAP1 patients, guide the development of targeted therapies, pinpoint appropriate timing for interventions, and determine relevant outcome measures for clinical trials. Indeed, clinical trials for rare disorders are constructed differently from trials for more common diseases because of the low incidence of rare disorders. NHS data improves our understanding of a genetic condition and therefore can inform which clinical endpoints or outcomes will be the most informative when designing novel clinical trials, which will ultimately determine whether a treatment or therapy is effective or not.

Collaboration among researchers, healthcare providers, patient advocacy groups, and pharmaceutical companies is often necessary for conducting NHSs on rare disorders. Such collaborations can pool resources, expertise, and patient populations to conduct meaningful research. These relationships are equally important to building (the foundations for?) clinical trial readiness in the STXBP1 and SYNGAP1 disorders community. Regulatory agencies, such as the U.S. Food and Drug Administration (FDA) and the European Medicines Agency (EMA), normally require natural history data before approving clinical trials to assess potential therapeutics. During clinical trials, NHS data is crucial for demonstrating the safety and efficacy of a given treatment.

Clincal NHS figure

What does participation in the natural history study for STXBP1 and SYNGAP1 disorders look like?

When you and your child participate in the NHS for STXBP1 and SYNGAP1 disorders, you will have a day filled with both clinical and research appointments with dedicated teams at various study sites.

For SYNGAP1 disorders, there is currently one site: CHOP’s Epilepsy and Neurodevelopmental Disorders program (ENDD).

For STXBP1 disorders, there are currently four sites nationwide: CHOP’s Epilepsy and Neurodevelopmental Disorders program (ENDD), Children’s Hospital Colorado, Texas Children’s Hospital, and Weill Cornell Medicine. The STXBP1 disorders NHS is also known as the STARR study .

During your visit, you’ll meet with various healthcare professionals who specialize in caring for children with STXBP1 and SYNGAP1 disorders. These experts may include:

  • Neurologist: Discussing topics like epilepsy management and medication.
  • Genetic Counselor: Exploring genetic variant interpretations.
  • Physical Therapist and Occupational Therapist: Offering guidance on developmental milestones and providing recommendations or plans for at-home therapists.
  • Developmental and Behavioral Pediatrician or Neuropsychologist: Providing strategies for behavior management.

To ensure we address all of your concerns and provide tailored medical recommendations, please plan for a full day of appointments.

We are also interested in hearing from you and other caregivers who are closely involved in your child’s care. We’re partnering with a specialized company to collect caregiver-reported outcomes. These standardized scales provide insights into the day-to-day life of caring for a family member with these disorders, offering a unique perspective beyond measures typically collected in clinical appointments.

If you would like to enroll in either of our natural history studies, or would like more information, please contact us at endd@chop.edu.